.gitignore
LICENSE
README.md
pyproject.toml
test/test_dataset.py
test/test_mutation.py
test/test_pipeline.py
test/test_sequence.py
tidymut/__init__.py
tidymut.egg-info/PKG-INFO
tidymut.egg-info/SOURCES.txt
tidymut.egg-info/dependency_links.txt
tidymut.egg-info/requires.txt
tidymut.egg-info/top_level.txt
tidymut/cleaners/__init__.py
tidymut/cleaners/base_config.py
tidymut/cleaners/basic_cleaners.py
tidymut/cleaners/human_domainome_cleaner.py
tidymut/cleaners/human_domainome_custom_cleaners.py
tidymut/cleaners/k50_cleaner.py
tidymut/cleaners/protein_gym_cleaner.py
tidymut/cleaners/protein_gym_custom_cleaners.py
tidymut/core/__init__.py
tidymut/core/alphabet.py
tidymut/core/codon.py
tidymut/core/constants.py
tidymut/core/dataset.py
tidymut/core/mutation.py
tidymut/core/pipeline.py
tidymut/core/sequence.py
tidymut/core/types.py
tidymut/utils/__init__.py
tidymut/utils/cleaner_workers.py
tidymut/utils/dataset_builders.py
tidymut/utils/mutation_converter.py
tidymut/utils/sequence_io.py
tidymut/utils/type_converter.py