numpy>=1.25.2
pandas>=2.3.3
scipy>=1.11.3
scanpy>=1.9.5
anndata>=0.9.2
numba>=0.60.0
muon>=0.1.5
tqdm

[dev]
pytest
pytest-cov
ruff
build
twine

[docs]
sphinx>=7.0
sphinx-rtd-theme
myst-parser
sphinx-autodoc-typehints
sphinx-copybutton
nbsphinx
