# medaka requirements. 
# Add comments to keep track of why we are using particular versions
cffi==1.15.0  # no wheel for 1.15.1, note also in pyproject.toml and build-wheels.sh
edlib
grpcio 
h5py
intervaltree
tensorflow~=2.7.0
numpy
mappy
ont_fast5_api
parasail
pysam>=0.16.0.1       # 0.16.0 is broken, various others too
pyspoa>=0.0.3         # 0.0.2 has portable instruction set, and py38 wheels
requests
