numpy>=1.18.1
pandas>=0.25.1
scipy>=1.0
scikit-learn>=0.19.1
cvxopt>=1.2.3
anndata>=0.6.18
loompy>=3.0.5
matplotlib>=3.1.0
trimap>=1.0.11
setuptools
numdifftools>=0.9.39
umap-learn>=0.4.3
hdbscan>=0.8.26
PATSY>=0.5.1
statsmodels>=0.9.0
numba>=0.46.0
seaborn>=0.9.0
colorcet>=2.0.1
datashader>=0.9.0
bokeh>=1.4.0
holoviews>=1.9.2
tqdm
python-igraph>=0.7.1
pynndescent>=0.4.8

[dimension_reduction]
fitsne>=1.0.1

[spatial]
pysal>2.0.0

[test]
sympy>=1.4
